HomeMy WebLinkAboutDWQ-2024-004512Sediment Overview
Science Panel Meeting | March 23, 2023
Purpose of Today’s Discussion
•Review studies conducted on Utah Lake
sediment nutrient cycling
•Contextualize importance of sediment
characterization in NNC development
Context: How will sediment data be used?
•All information from the Utah Lake Water Quality Study could be used for:
Responding to charge questions
Informing the Utah Lake Nutrient Model
Informing Technical Support Document development
Informing implementation planning
•Specifically, sediment research will be used for:
Responding to sediment-related charge questions
Informing the sediment-relevant parts of the ULNM (e.g., sediment diagenesis, settling)
Informing potential timescales for implementation planning
Key Studies to Date
•Sediment fluxes and equilibrium P concentration study
•Littoral sediment study
•P binding study
•TSSD Limnocorral study
•Carbon, Nitrogen, and Phosphorus (CNP) study
•Brett mass balance analysis
•Other studies from the literature
CNP Study (Tetra Tech)
•Literature review of nutrient-relevant
processes and pools in Utah Lake
Sediment-related sources included:
–Merrell 2015 (thesis)
–Randall 2017 (thesis)
–Wang et al. 2017
–Abu Hmeidan et al. 2018
–Hogsett et al. 2019
–Randall et al. 2019
–Reidhead 2019 (thesis)
–Goel et al. 2020 (report)
•Conceptual model
Includes sediment pools and fluxes across
the sediment-water interface
•External mass balance
Did not involve sediments
•Internal mass balance
SedFlux model
CNP Study: SedFlux Model
•Purpose: model nutrient fluxes & sediment oxygen demand across the sediment-
water interface
•Adapted from original work for QUAL2K and WASP (DiToro 2001)
•Straightforward application of the current model setup
Input data for Utah Lake, reaction network parameters from Su and von Stackelberg (2020)
No calibration
Should defer to results of EFDC/WASP and field observations when available
TP
Main Basin: 0.01-1 mg/L
Provo Bay: 0.05-1 mg/L
PP
0-1 mg/L
Phosphorus model
Sediment
Water
Outflow TP
23-84 tons/yr
TP
Main Basin: 280-1730 mg/kg
Provo Bay: 465-1900 mg/kg
Phytoplankton
0.7-2 % P
TDP
0.003-1 mg/L
DOP
0-0.18 mg/L
PO43+≈ SRP
Main Basin: 0.01-0.85
mg/L
Provo Bay: 0.02-4 mg/L PIP
Zooplankton
0.5-1.6 % P0.05-160,000 µg/L (small)
50-1,600 µg/L (large)
Fish
1-4.5 % P
0.1-4.5 kg/acre
BD fraction
Fe/Mn compounds
49.1±1.8% (41-61%)
HCl fraction
CaPO4 or acid-soluble
organic P
38.6±2.1% (25-47%)
NH4Cl, NaOH, and residual fractions
Loosely bound, exchangeable and
organic P, refractory P
12.4%
Confidence
Very high
High
Medium
Low
Very low
Porewater TDPMain Basin: 1.48 mg/L (0.26-10.82)
Provo Bay: 3.85 mg/L (0.40-6.78)
Dashed boxes are
derived from
Randall et al.
2019 (PLoS ONE)
External TP Loading
Inflow sources
(streams, WWTPs, drains,
springs, groundwater,
precipitation)
152-298 tons/yr
Atmospheric Deposition
31-45 tons/yr
TDP Release
1.7-1.9 ±0.7-4.0 tons/d
SRP Release
-4.5-27.2 tons/d
Periphyton
Negligible
Macrophytes
0.2-0.6 % P
Macroinvertebrates
5.3-17.0 mg/g dry weight
Uptake
0.1-100 ng/(L*h)Uptake
0.17-480
µg/(ind.*d)
Uptake not
possible to
calculate
Excretion, decomp: negligible (periphyton), 0-496 µg/(g dry weight*h) (macroinvertebrates)
Uptake negligible
Excretion
0.01-1,000 µg/(ind.*d)
Excretion, Decomp.
0.1-100 ng/(L*h)
Excretion
Carp: 51.1-117 tons/yr
Uptake not possible to
calculate Excretion, decomp.
not possible to
calculate
Uptake not
possible to
calculate
PP settling
192-1,230 tons/y
0-83 tons/d
PP resuspension
173-257 tons/y
0-82 tons/d
Literature-
derived values
TN
0-3000 mg/kg
TN
Main Basin: 0.04-12.4 mg/LProvo Bay: 0.7-12.4 mg/L
PN
0-0.50 mg/L
Nitrogen model
Sediment
Water
Outflow TDN
367 tons/yr150-6,847 kg/d
TDN
0.29-5.32 mg/L DON
0-11.9 (from TKN)
0-1.9 mg/L
(from TDN)
DIN0.01-7.5 mg/L
NO2-+ NO3-
0.001-5.2 mg/L NH3 + NH4+
0.003-5.0 mg/L
Confidence
Very high
High
Medium
Low
Very low
External TN Loading
Inflow sources
(streams, WWTPs, drains, springs, groundwater,
precipitation)
2022-2542 tons/yr
Atmospheric Deposition
218-249 tons/yr
Phytoplankton
5-9 % N
Zooplankton
5-14 % N
0.5-1,400,000 µg/L (small)
500-14,000 µg/L (large)
Fish8-12 % N
0.8-20 kg/ac
Excretion, Decomp.
10-10,000 ng/(L*h)
TIN Release
-3.8-554.4 tons/d
Ammonia Release
-12.7-554.4 tons/d
Macrophytes
0.8-1.3 % of dry mass
Macroinvertebrates
42.7-141.2 mg/g dry
weight
Porewater TDN
0-16 mg/L
Atmospheric N2
Denitrification,
anammox
1,372 tons/yr
Water column N
fixation
0-4.65 µg/(L*h)
Benthic N fixation
0.1-1.0 tons/h
Uptake
10-10,000
ng/(L*h)
Literature-derived values
Uptake
1.2-2,160 µg/(ind.*d)
Excretion
0.01-10,000 µg/(ind.*d)
Excretion
Carp: 496-1,140 tons/yr
Uptake not
possible to
calculate
Uptake not possible
to calculate Excretion, decomp.
not possible to
calculate
Periphyton
Negligible
Excretion, decomp: negligible (periphyton), 0-168 µg/(g dry weight*h) (macroinvertebrates)
Uptake negligible Uptake not
possible to
calculate
PN settling
0-130 tons/d
PN resuspension0-129 tons/d
SedFlux: NH4+, NO3-, and SRP
•Fluxes across sediment-water interface
NH4+ and SRP: positive flux to the water column
NO3-: positive flux to the water column in summer,
negative flux to the sediment in spring & fall
•Model predicted higher flux rates under high
organic matter supply
•Model predicted more variable rates when
water column was shallow
SedFlux: SOD
•Model predicted higher flux rates under high organic matter supply and deeper water column
•Modeled SOD was higher than measured SOD by an order of magnitude modeled rates likely unrealistic
•SOD was not particularly sensitive to reaction network parameters
•SOD was sensitive to:
Water column DO concentration (accurate)
Settling rate of POC (inaccurate?)
•Hypotheses…
Sediment dilutes incoming POC
Frequent resuspension does SOD become BOD?
SedFlux may not capture important factors driving SOD
SedFlux: Comparisons to field observations
•SRP, NH4+, NO3-comparable to other studies
•SOD substantially higher than other studies
Rate
(g m-2 d-1)
Main Basin
Tetra Tech CNP Hogsett et al.
2019 Goel et al. 2020
Provo Bay
Tetra Tech CNP Hogsett et al.
2019 Goel et al. 2020
SRP Flux 0.006-0.20 -0.004-0.071 -0.0024 ±
0.0042 0.005-0.17 0.01 -0.012 ±0.0097
NH4+Flux 0.03-1.23 -0.033-0.141 -0.0098 ±
0.0034 0.005-0.89 1.442 -0.017 ±0.01
NO3-Flux -0.01-0.01 -0.008-0.08 ---0.13-0.009 0 --
SOD 4.90-14.38 0.9-2.04 2.97 1.91-14.58 4.61 0.05
Sediment-Related Charge Questions
•What are current sediment equilibrium P concentrations (EPC) throughout the
lake? What effect will reducing inputs have on water column concentrations? If
so, what is the expected lag time for lake recovery after nutrient inputs have
been reduced?
•What is the sediment oxygen demand of, and nutrient releases from, sediments
in Utah Lake under current conditions?
•Does lake stratification [weather patterns] play a result in anoxia and
phosphorus release into the water column? Can this be tied to HAB formation?
What are current sediment equilibrium P concentrations (EPC) throughout the lake?
What effect will reducing inputs have on water column concentrations? If so, what is
the expected lag time for lake recovery after nutrient inputs have been reduced?•EPC: water column P conc. at which there is no net exchange with sediments
•Goel et al. 2020: 0.27 mg/L in main basin, 0.86 mg/L in Provo Bay
•Controlled batch experiments would more precisely identify EPC (P binding study)
•Expect some degree of enhanced sediment loading following water column
reductions until equilibrium is reached mass balance analysis by M. Brett
What is the sediment oxygen demand of, and nutrient releases from,
sediments in Utah Lake under current conditions?
•4 studies have addressed this topic
Hogsett et al. 2019
Randall et al. 2019
Goel et al. 2020
Tetra Tech 2021 (CNP)
•Sediments are a net sink for total nutrients
•Bioavailable forms of N and P are released from
the sediments
•Rates are spatially variable
Does lake stratification [weather patterns] play a result in anoxia and
phosphorus release into the water column? Can this be tied to HAB
formation?
•Evidence of transient thermal stratification, no persistent seasonal stratification
•Thus, do not expect hypolimnetic DO depletion and nutrient accumulation
•Possible that local zones of anoxia do form
•Some sediment P is bound to redox-sensitive iron compounds
•Frequent wind-driven mixing brings surface sediments into contact with the water column
(Tetra Tech 2021)
Questions and Discussion
Mitch Hogsett, PE, PhD
SOD, Nutrient Fluxes,
and Sediment Characteristics
Topics
1.SOD and WC Respiration (dark conditions)
2.Sediment and WC Nutrient Dynamics
3.Sediment Mineralogy
4.Sediment P-Speciation
Sediment Oxygen Demand
Sediment Oxygen Demand
SOD and WC Respiration
SOD20 and SOD13
Temp SOD SOD20 SOD20 SOD13 SOD13
Site (C)(g/m2/d)(g/m2/d)%difference (g/m2/d)%difference
1 17.1 -4.61 -5.76 125%-3.36 73%
2 23.5 -1.42 -1.08 76%-0.63 45%
3 22.5 -1.49 -1.23 82%-0.72 48%
4 18.3 -2.04 -2.33 114%-1.36 67%
5 22 -1.67 -1.43 86%-0.84 50%
6 19.1 -1.03 -1.10 107%-0.64 63%
7 23 -1.06 -0.84 79%-0.49 46%
8 22.9 -0.9 -0.72 80%-0.42 47%
Nutrient Dynamics
Sediment Nutrient Fluxes
1.5 !"#
$!∗&'(
)*+"#$%&
,*+"'!$%&
$-./
)01 $-.2
,)+"($%&
)*+"#$%&
= 0.014 !/
$!∗&'(
DIN
WC Nutrient Rates
Annual sediment fluxes estimates
All site average annual load
•1,500 tons P/year, 7,500 tons N/year
Utah Lake proper average annual load
•950 tons P/year, 4,750 tons N/year
Utah Lake proper SOD13 annual load
•520 tons P/year,2,612 tons N/year
Sediment TS and VS
Sediment Minerology
Sediment P-Speciation
Questions?
Technical Support Document Overview
Science Panel Meeting | March 23, 2023
•Provide the technical basis for the
development of numeric nutrient criteria (NNC)
to protect designated uses
•Recreation
•Aquatic Life
•Others (Agriculture, Downstream)
•Conduct analyses to support multiple lines of
evidence in the NNC framework
Purpose of the Technical
Support Document
Lines of Evidence
1.Reference-based
Results from paleolimnological studies
Utah Lake Nutrient Model prediction/extrapolation of reference conditions
2.Stressor-response analysis
Utah Lake Nutrient Model output
Statistical models
3.Scientific literature
Scientific studies of comparable/related lake ecosystems
Support/supplement other lines of evidence
Lines of Evidence
1.Reference-based
Results from paleolimnological studies
Utah Lake Nutrient Model prediction/extrapolation of reference conditions
2.Stressor-response analysis
Utah Lake Nutrient Model output
Statistical models
3.Scientific literature
Scientific studies of comparable/related lake ecosystems
Support/supplement other lines of evidence
Stressor-Response Analysis
•Output from the Utah Lake Nutrient model (current and reduced nutrient loading)
•In-lake monitoring data for water quality variables
•Application of EPA’s Ambient Water Quality Criteria nutrient models
Stressor-Response Analysis
•a
Use Assessment
Endpoint Stressor Response Empirical S-R
Data Available
Mechanistic
Model Output
Recreation, Aquatic Life,
Agriculture, Drinking Water Algal toxins Chlorophyll a Microcystin concentration Yes No
Recreation, Aquatic Life,
Agriculture, Drinking Water Algal toxins Cyanobacterial abundance Microcystin concentration Yes No
Recreation Algal blooms Chlorophyll a Cyanobacterial abundance Yes Yes
Recreation, Aquatic Life pH Chlorophyll a pH Yes Yes
Recreation Lake visitation Chlorophyll a Annual visitation Yes No
Recreation Lake visitation Cyanobacterial abundance Annual visitation Yes No
Recreation Lake visitation Kd, Secchi depth Annual visitation Yes No
Recreation Public perception Chlorophyll a Public perception User perception No
Recreation Public perception Cyanobacteria abundance Public perception User perception No
Recreation Public perception Kd, Secchi depth Public perception User perception No
Aquatic Life DO Chlorophyll a DO Yes Yes
Aquatic Life Food resources Chlorophyll a Zooplankton:Phytoplankton National Model No
Aquatic Life Food resources Chlorophyll a Proportion cyanobacteria Yes Yes
Aquatic Life Light Chlorophyll a Kd, Secchi depth Yes Yes
Criteria Setting TN & TP Chlorophyll a Yes Yes
Criteria Setting TN & TP Cyanobacterial abundance Yes Yes
Criteria Setting TN & TP Kd, Secchi depth Yes Yes
Primary Datasets
Water Chemistry
Grab data (surface and integrated)
Multiple parameters
Many sites around the lake
Primary data providers: DWQ & WFWQC
Continuous Buoy Data
Surface data
DO, pH, temperature, turbidity,
chlorophyll & phycocyanin fluorescence
4 sites
Data provider: DWQ
•Phytoplankton
Surface composite and surface “scum”
Phytoplankton taxa abundance, toxins
Many sites around the lake
Data providers: DWQ & WFWQC
•Zooplankton
Zooplankton tows, presumably surface
Zooplankton taxa abundance
Many sites around the lake
Data providers: USU, WFWQC, BYU
General Stressor-Response Approach
•Statistical Models
Linear regression
Quantile regression
Logistic regression
•Assign a threshold for the response
•Account for uncertainty and protectiveness
Confidence/credible interval
Prediction interval/quantile
Purpose of Today’s Discussion
•Highlight data availability for S-R
relationships of interest
•Make decisions about aggregation
approach
•Set stage for future feedback on
statistical approach, management-
relevant decisions
Review of Stressor-Response Relationships of Interest
What you will see today:
Previous data analysis, for context
Un-aggregated S-R visualizations for compiled dataset
inform aggregation and statistical approach
Microcystin vs. Chlorophyll and Cyanobacteria
•Previous analysis: + correlation between cyano cell count and microcystin
•Linear regression and/or logistic regression may be appropriate
•Threshold: 8 µg/L (EPA 2019 recommended recreational criteria)
Microcystin vs. Chlorophyll and Cyanobacteria
Several factors explained variability in cyano. and microcystin
Surface “scum” vs. composite
Location within the lake
Microcystin vs. Chlorophyll and Cyanobacteria
•National model: links chlorophyll,
cyanobacteria, microcystin from NLA data
•Location-specific settings: ecoregion, lake
max. depth
•Note: Utah Lake morphometry is at the
edge of the distribution of NLA lakes
site-specific analysis may be more
informative
Cyanobacteria vs. Chlorophyll
•May use this relationship to relate cyanobacteria abundance thresholds to a
potential chlorophyll target (see EPA 2019, Ravenscroft SC presentation 2021)
Cell count: potential thresholds of 20,000, 40,000, 100,000 cells/mL
Biovolume
Relative abundance
EPA 2019 reviews state and international guidelines/action levels, WHO guidance
pH vs. Chlorophyll
•Expect to see diel pH cycles
aligning with photosynthesis (+)
and respiration (-)
•Utah Lake has high alkalinity
typically see exceedances at 9
rather than 6.5
•pH criteria is a “not to exceed”
•Exceedances of pH criteria
occur at all sites, most
consistently at Provo Bay (red)
pH vs. Chlorophyll
•Linking pH with chlorophyll
Best pH data will come from continuous sondes
Best chlorophyll data will come from grab data
•Need to link parameters in space and time think about aggregation approach
DO vs. Chlorophyll
•DO has 3 criteria measures
Daily minimum (5 and 3 mg/L)
7-day mean (4 and 6 mg/L)
30-day mean (5.5 mg/L)
•Some exceedances across sites,
most in Provo Bay (red)
DO vs. Chlorophyll
•Linking DO with chlorophyll
Best DO data will come from continuous sondes
Best chlorophyll data will come from grab data
•Need to link parameters in space and time think about aggregation approach
Zooplankton vs. Chlorophyll: National Model
•Analyzes the trophic relationship between phytoplankton and zooplankton
Reflects efficiency of energy transfer between trophic positions
A tight linkage between chlorophyll and zooplankton is observed at lower chlorophyll
Relationship becomes decoupled at higher chlorophyll
•To identify a chlorophyll target, select a slope threshold that protects against the
trophic decoupling
Zooplankton vs. Chlorophyll
•Several zooplankton data for Utah Lake
USU
WFWQC
BYU
•Need to make sense of how to combine (different methods, taxa output)
•What are the metrics of interest?
Total, certain taxa?
For any metrics, will need to be able to link to protection of designated use
•Could update the national model with Utah Lake data, or use the national
model conceptual setup to inform site-specific model
Public Perception vs. Chlorophyll, Cyanobacteria, Clarity
User perception survey is underway
Annual Visitation vs. Chlorophyll, Cyanobacteria, Clarity
•Utah DNR keeps record of visitation of Utah Lake State Park
•Imperfect metric; does not capture total visitation to the lake
•Additional data from user perception survey?
•Can link visitation data to water quality data
Monthly totals for visitation, subset for growing season?
Growing season chlorophyll, cyanobacteria, clarity
Clarity vs. Chlorophyll
•Secchi depth negatively related to chlorophyll
•Variability in this relationship high proportion of non-algal turbidity
•Need to establish threshold for protective Secchi depth value
Chlorophyll vs. TN and TP
•Once chlorophyll target(s) identified, can link chlorophyll to nutrients
•Positive relationship, variability could be due to nutrient limitation and non-
bioavailable nutrient pools
•Unequal variance may be suited for quantile regression
Chlorophyll vs. TN and TP
•EPA National Models include chlorophyll-nutrient models
•Takes into account other pools of P and N (blue line) vs. phytoplankton (black line)
•Lake-specific settings: ecoregion, lake max. depth, DOC, turbidity
Cyanobacteria vs. TN and TP
•Previous Analysis
Quantiles: 0.1, 0.25, 0.5, 0.75, 0.9
Logistic regression w/ threshold of
100,000 cells/mL
Clarity vs. TN and TP
•Secchi depth negatively related to TP and TN
•Variability in this relationship high proportion of non-algal turbidity
•Need to establish threshold for protective Secchi depth value
Decision Points for Today
•Seasonal aggregation
•Depth considerations
•Period of interest
•Spatial aggregation
Decision Points: Aggregation
•Growing/recreation season
April-September
Statistical metric: mean, geometric mean, median?
•Depths to represent surface
Suggest ≤ 1 m and composite surface
Decision Points: Aggregation
•Period of interest
Use all available data?
Use data only from x years ago to present?
Decision Points: Aggregation
•Extent: break lake into regions?
Utah Lake currently has two Assessment Units:
main basin and Provo Bay
Add Goshen Bay as a separate zone?
May lead to different targets for each region
consider management implications
How to combine spatial and temporal
aggregation?
–Aggregate all sites for a given date, then
aggregate to growing season
–Aggregate each site to growing season,
then aggregate across sites
–Aggregate all samples across sites and
dates for a growing season
Decision Point: Statistical Approach, Uncertainty, Protectiveness
•Statistical approach: Tetra Tech will propose a draft set of analyses for SP
feedback
•Uncertainty and Protectiveness: Tetra Tech will pose choices to SP
Linear regression: choose prediction interval, confidence interval
Quantile regression: choose quantile
Logistic regression: choose probability
National models (Bayesian): Credible interval, aka certainty level
•Also need to coordinate this with DWQ standards staff
Evaluating Numeric Targets
•Magnitude
“the maximum amount of the contaminant that may be present in a water body that supports
the designated use”
This value is most readily identified from analyses
•Frequency
“the number of times the contaminant may be present above the magnitude over the specified
period (duration)”
Examples: not to be exceeded, x exceedances in a season, x exceedances in y years
•Duration
“the period over which the magnitude is calculated“
Examples: grab (single date), seasonal central tendency
•Some parameters already have these defined (e.g., microcystin, DO, pH)
Questions and Discussion
SEDIMENT DIAGENESIS
THE MISSING
LINK
External
Loads
Sediment
Demands
and Releases
Prepared by
James L. Martin
July, 2016
SEDIMENT OXYGEN DEMAND
AND NUTRIENT RELEASE
•Sediment diagenesis results in oxygen demands and
nutrient releases
SEDIMENT OXYGEN DEMAND
AND NUTRIENT RELEASE
•Sediment diagenesis results in oxygen demands and nutrient releases
–a major sink of oxygen in aquatic environments
•Leads to hypoxia
–Hypoxic or Dead zones are becoming more common in estuarine and coastal environments and have, as reported in Science (Diaz and Rosenberg, 2008), spread exponentially since the 1960s and resulting in serious consequences for ecosystem functioning
–As of 2008 (Diaz and Rosenberg 2008), dead zones have been reported from more than 400 systems, affecting a total area of more than 245,000 square kilometers.
SEDIMENT OXYGEN DEMAND
AND NUTRIENT RELEASE
•Sediment diagenesis results in
oxygen demands and nutrient
releases
–a major source of nutrients in
aquatic environments
•Leads to eutrophication
•Impacts nutrient criteria
development
SEDIMENT OXYGEN DEMAND
AND NUTRIENT RELEASE
SEDIMENT OXYGEN DEMAND
AND NUTRIENT RELEASE
•So, how is it determined?
–1) GUESS (e.g. model calibration)
0
1
2
3
4
5
6
7
00.511.522.533.5
River Mile
DO
C
o
n
c
e
n
t
r
a
t
i
o
n
(
m
g
/
l
)
Average
Minimum
Maximum
Without SOD
With SOD
SOD
BOD
Reaeration
A REALLY BAD
IDEA!!
SEDIMENT OXYGEN DEMAND
AND NUTRIENT RELEASE
•So, how is it determined?
–2) MEASURE
•How many measurements?
•Where and When?
THIS IS EXPENSIVE!
SEDIMENT OXYGEN DEMAND
AND NUTRIENT RELEASE
•So, how is it determined?
–2) MEASURE (Core method)
•How many measurements?
•Where and When?THIS IS EXPENSIVE!
University of Maryland Center for Environmental Science, 2006
SEDIMENT OXYGEN DEMAND
AND NUTRIENT RELEASE
•So, how is it determined?
–2) MEASURE
•ALSO: how do we relate these
measurements to external loads?
•Sediment Diagenesis is driven by organic
fluxes from the water column, which are
ultimately derived from external loads
CAUSE
EFFECT
THE MISSING LINK
SEDIMENT OXYGEN DEMAND AND NUTRIENT
RELEASE
•Ex. For wasteload allocations assume it does not change in
response to load changes (i.e., use measured values)?
Your permit will
be based on
assuming SOD
will not change!
That’s ridiculous, I will
see you in Court you
%^$@!!+@!
SEDIMENT OXYGEN DEMAND
AND NUTRIENT RELEASE
•So, how is it determined?
–3) MODEL (e.g. QUAL2K, CE-QUAL-
ICM, WASP routines)
From Chapra Pelletier,
2003. QUAL2K User
documentation
Di Toro, D. M. 2001. Sediment Flux
Modeling, Wiley-Interscience, New York, New
York. 624 pp.
MODEL OVERVIEW
Sediment Diagenesis
See: Martin and Wool, 2014, “WASP Sediment Diagenesis
Routines: Model Theory and User's Guide”
Particulate
Organics (C,
N, P)
Oxygen
Dissolved
Materials
(N,P,CH4,H2S,
etc.)
Sediment Diagenesis
Surface Area
Solids
Concentration in
Layer 1 (kg/L)
Solids
Concentration in
Layer 2 (kg/L)
Thickness
(assumed =
2 cm)
H2 =Thickness
(≈= 10 cm)
Diffusion
(T-20)
d12
2
DKL = (H /2)
θ
Burial velocity to inactive
sediments (m/day)
Particle
Mixing
Reactor
Diffusion:
internal
computation
Particle
Mixing
Benthic Stress
The rate of mixing of the sediment by
macrobenthos (bioturbation, w12) is estimated
by an apparent particle diffusion coefficient
(Dp), temperature corrected that varies with
the biomass of the benthos. Assuming that the
mass of the benthos is proportional to the
labile carbon in the sediment ( , or POC, in
oxygen equivalents in layer 2 in G class 1),
( 20),1*12
2,/2
tTPOC
P
POC R
CwDHC
Θ −=
where is a particle mixing coefficient and CPOC,R is a
reference POC concentration. (Note POC is in units of
oxygen equivalents).
Particle
Mixing
Benthic Stress
An additional impact is that if anoxia occurs for
periods of time, the benthic population is
ultimately reduced or eliminated, so that
bioturbuation is consequently reduced or
eliminated. To include this effect, Di Toro
(2001) computes the stress that low dissolved
oxygen conditions (benthic stress, S) imposes
on the population assuming that the stress
accumulates as
,
,2[ (0)]
P
P
tt tMDtt
s
MD
KS SSkSt KO t
∆∆
∆
++∂−=−+ ≈∂+
where ks = decay constant for benthic stress, KM,Dp =
particle mixing half-saturation concentration for oxygen
As [O2(0)] approaches zero, then (1-ksS) approaches
zero, so that the particle mixing coefficient is
similarly reduced, as
()*12 12
1 ttsw w kS
∆+= −
The stress is continued at the minimum value for the
year to conform with the observation that once the
benthic population has been reduced by low dissolved
oxygen, it does not recover until the next year (Di Toro
2001).
Reactor Inputs
Constants Value Units Description
SA SA 2832.68 m2 Surface area of sediments (computed)
m1 m1 0.5 kg/L Solids concentration in layer 1
m2 m2 0.5 kg/L Solids concentration in layer 2
Dd Dd 2.50E-03 m2/d Diffusion coefficient between layers 1 and 2
ΘDd ThtaDd 1.08 none Temperature correction factor for Dd
H2 H2 0.1 m Thickness of layer 2
w2 w2 6.85E-06 m/d Burial velocity for layer 2 to inactive sediments
Dp Dp 6.00E-05 m2/day Diffusion coefficient fo particle mixing
ΘDp ThtaDp 1.117 none Temperature correction factor for Dp
POC1,R POC1R 0.1 mgC/g Reference POC1 concentration for Dp measurement
ks kBEN_STR 0.03 1/day First-order decay coefficient for accumulated benthic stress
KM,Dp KM_O2_Dp 4 mgO/L M-M half-saturation constant for oxygen wrt benthos
Fluxes IN JPOM
JPOM=vsACPOM
vs=settling velocity, A=area, CPOM =POM
concentration
JPOM
JPOC JPON JPOP
G1 G2 G3 G1 G2 G3G1G2G3
G classes represent reactivity:
G1=labile, G2=refractory, G3=inert
G Class Input JPOM
fPON1 fPON1 0.65 Fraction of PON that is labile
fPON2 fPON2 0.25 Fraction of PON that is refractory
fPOP1 fPOP1 0.65 Fraction of POP that is labile
fPOP2 fPOP2 0.2 Fraction of POP that is refractory
fPOC1 fPOC1 0.65 Fraction of POC that is labile
fPOC2 fPOC2 0.2 Fraction of POC that is refractory
JPOM
JPOC JPON JPOP
G1 G2 G3 G1 G2 G3G1G2G3
Mass Balance (for each POM
and G class)
JPOM
2
1
()()tt t tt tt tt tt tt tt tt ttTTpT pT L dT dT T T T T
HC HC fCfC KfCfC C CC Jtt
++ ++ + + ++ +− =− − − − − + −+
22 22 12 22 11 12 22 11 22 2 1 2 2
()ω κω∆∆ ∆∆ ∆ ∆ ∆∆ ∆
∆∆
bioturbation diffusion diagenesis burial influx
s = surface transfer rate; SOD/[O2(0)], where SOD=SOD rate and
O2(0) is the overlying water concentration
fd1 = fraction dissolved in layer 1
fd2 = fraction dissolved in layer 2
fp1 = fraction particulate in layer 1
fp2 = fraction particulate in layer 2
CT1t+∆t = total concentration in layer 1 at time t+∆t
CT2t+∆t = total concentration in layer 2 at time t+∆t
CT2t = total concentration in layer 2 at time t
CdOt+∆t = concentration in overlying water column
KL12 = mass transfer coefficient via diffusion
ω12 = particle mixing coefficient between layers 1 and 2
ω2 = sedimentation velocity for layer 2
JT1t+∆t = source term for total chemical in layer 1 at time t+∆t
JT2t+∆t = source term for total chemical in layer 2 at time t+∆t
κ12 = square of reaction velocity in layer 1
Diagenesis in
Layer 2
Diagenesis Input
JPOM
2
1
()()tt t tt tt tt tt tt tt tt ttTTpT pT L dT dT T T T T
HC HC fCfC KfCfC C CC Jtt
++ ++ + + ++ +− =− − − − − + −+
22 22 12 22 11 12 22 11 22 2 1 2 2
()ω κω∆∆ ∆∆ ∆ ∆ ∆∆ ∆
∆∆
bioturbation diffusion diagenesis burial influx
Diagenesis in
Layer 2
kPON1 kdiaPON1 0.035 1/day First order diagenesis (decay) rate constant for PON1
ΘPON1 ThtaPON1 1.1 none Temperature correction factor for kdiaPON1
kPON2 kdiaPON2 0.0018 1/day First order diagenesis (decay) rate constant for PON2
ΘPON2 ThtaPON2 1.15 none Temperature correction factor for kdiaPON2
kPON3 kdiaPON3 0 1/day First order diagenesis (decay) rate constant for PON3
ΘPON3 ThtaPON3 1.17 none Temperature correction factor for kdiaPON3
kPOP1 kdiaPOP1 0.035 1/day First order diagenesis (decay) rate constant for POP1
ΘPOP1 ThtaPOP1 1.1 none Temperature correction factor for kdiaPOP1
kPOP2 kdiaPOP2 0.0018 1/day First order diagenesis (decay) rate constant for POP2
ΘPOP2 ThtaPOP2 1.15 none Temperature correction factor for kdiaPOP2
kPOP3 kdiaPOP3 0 1/day First order diagenesis (decay) rate constant for POP3
ΘPOP3 ThtaPOP3 1.17 none Temperature correction factor for kdiaPOP3
kPOC1 kdiaPOC1 0.035 1/day First order diagenesis (decay) rate constant for POC1
ΘPOC1 ThtaPOC1 1.1 none Temperature correction factor for kdiaPOC1
kPOC2 kdiaPOC2 0.0018 1/day First order diagenesis (decay) rate constant for POC2
ΘPOC2 ThtaPOC2 1.15 none Temperature correction factor for kdiaPOC2
kPOC3 kdiaPOC3 0 1/day First order diagenesis (decay) rate constant for POC3
ΘPOC3 ThtaPOC3 1.17 none Temperature correction factor for kdiaPOC3
Ammonia
JPOM
2
1
Diffusion
(dissolved)
Bioturbation
(particulate)
Diffusion
(dissolved)Burial
(particulate)
Burial
(particulate)
+ Flux due to diagenesis of PON
-Nitrification
Ammonia Input
4111
41 41
1 ;11NHdp
NH NH
SffSS
π
ππ==++
4221
42 42
1 ;11NHdp
NH NH
SffSS
π
ππ==++
Partitioning
where S1 and S2 are solids concentrations
in layer 1 and 2 and is a partition
coefficient
T
NH tt
O NH d NH T
nitrification f f f Cs
−
+= −
2 204,1 4 1 4 ,1
κθ ∆
JPOM
2
1
Diffusion
(dissolved)
Bioturbation(particulate)
Diffusion
(dissolved)Burial
(particulate)
Burial
(particulate)
+ Flux due to diagenesis of PON
-nitrification
2,0
2,0 4, 2
O
NH O
OfOK=+
44
4,1 4
NHNHt
NH NH
KfCK=+
s=surface transfer/diffusion rate with water column, κNH4=
reaction velocity, =temperature coefficient, O2,0=dissolved oxygen concentration in the overlying water
column, and KNH4,O2 =half-saturation concentration of
dissolved oxygen in the nitrification reaction, CNH4= ammonia concentration from the previous time step,
KNH4 = half-saturation concentration of ammonia in the
nitrification reaction
Ammonia Input
κNH3
KappaN
H3F 1.31E-01m/d First nitrification step (NH3→NO2) reaction velocity, fresh water
κNH3
KappaN
H3S 1.31E-01m/d First nitrification step (NH3→NO2) reaction velocity, salt water
ΘNH3 ThtaNH3 1.123none Temperature correction factor for κNH3
KM,NH3
KM_NH
3 0.728mg/L M-M half-saturation constant for ammonia in NH3→NO2
KM,O2,NH3
KM_O2_
NH3 0.37mg/L M-M half-saturation constant for oxygen in NH3→NO2
KdNH3 KdNH3 1L/kg NH3 distribution (partition) coefficient (both Layer 1 and Layer 2)
Note impact of salinity!
JPOM
2
1
Diffusion
(dissolved)
Bioturbation(particulate)
Diffusion
(dissolved)Burial
(particulate)
Burial
(particulate)
+ Flux due to diagenesis of PON
-nitrification
SALTND 1 ppt
Salinity above which salt water
nitrification and denitrification
rates apply
Nitrite
JPOM
2
1
Diffusion
(dissolved)
Diffusion
(dissolved)
Burial
(particulate)
+Nitrification to NO2 –
Reaction
(Nitrification) to NO3
Notes:
•assumed all dissolved;
•reaction rate modified by
oxygen in overlaying water and
temperature
•rate not impacted by salinity,
•Annamox not considered
Sedimentation
(Burial)
Nitrite Input
JP
OM
2
1
Diffusion
(dissolved)
Diffusion
(dissolved)
Burial
(particulate)
+Nitrification to NO2 –
Reaction (Nitrification)
to NO3
κN02 KappaNO2F 100m/d
Second nitrification step (NO2→NO3) reaction velocity, fresh
water
κN02 KappaNO2S 100m/d
Second nitrification step (NO2→NO3) reaction velocity, salt
water
ΘNO2 ThtaNO2 1.123none Temperature correction factor for κNO2KM,O2,NO2 KM_O2_NO2 0.37mg/L M-M half-saturation constant for oxygen in NO2→NO3
Nitrate
JPOM
2
1
Diffusion
(dissolved)
Diffusion
(dissolved)
Sedimentation
(Burial)
+Nitrification to NO3
Notes:
•assumed all dissolved;
•reaction rate modified by oxygen in
overlaying water and temperature
•denitrification rate impacted by
salinity,
•Annamox not considered
-Denitrification
-Denitrification
Sedimentation
(Burial)
Nitrate
JP
OM
2
1
Diffusion
(dissolved)
Diffusion (dissolved)
Sedimentation
(Burial)
+Nitrification to NO3-Denitrification
-Denitrification
Sedimentation
(Burial)
κN03,1 KappaNO3_1F 0.1m/d Denitrification reaction velocity in layer 1, fresh water
κN03,1 KappaNO3_1S 0.1m/d Denitrification reaction velocity in layer 1, salt water
ΘNO3 ThtaNO3 1.08none Temperature correction factor for κNO3 in both layer 1 and 2
Sulfides (Salt water only)
JPOM
2
1
Diffusion
(dissolved)
Bioturbation
(particulate)
Diffusion
(dissolved)Burial
(particulate)
Burial
(particulate)
+ Flux due to diagenesis of POC
(in oxygen units and corrected
for denitrification)
-decomposition of
particulate sulfide and
dissolved sulfide
Sulfide Input
Partitioning
where S1 and S2 are solids concentrations
in layer 1 and 2 and are partition
coefficients for layer 1 and 2
JPOM
2
1
Diffusion
(dissolved)
Bioturbation(particulate)
Diffusion
(dissolved)Burial
(particulate)
Burial
(particulate)
+ Flux due to diagenesis of PON
-decay
s=surface transfer/diffusion rate with water column, κ =
reaction velocities for particulate or dissolved form, O2,0=dissolved oxygen, and KMHS,O2=half-saturation
concentration of dissolved oxygen in the reaction, CH2S= sulfide concentration
,1 1
11
,1 1 ,1 1
1 ;11
HS
dp
HS HS
SffSS
π
ππ==++
,2 2
21
,2 2 ,2 2
1 ;11
HS
dp
HS HS
SffSS
π
ππ==++
2,0
,2
O
MHS O
OfK=DHS PHS tt
O d p HS
decay f f f Css
+=−+
22, 2 ,1 , 2 ,11 1 2 ,1
κκ ∆
Sulfide Input
JPOM
2
1
Diffusion
(dissolved)
Bioturbation(particulate)
Diffusion
(dissolved)Burial
(particulate)
Burial
(particulate)
+ Flux due to diagenesis of PON
-decay
kHS1 KappaHSD_1 0.2 m/d Dissolved sulfide oxidation reaction velocity in layer 1
kHS2 KappaHSP_1 0.4 m/d Particulate sulfide oxidation reaction velocity in layer 1
ThtaHS ThtaHS 1.079 none Temperature coefficient for sulfide oxidation
KM_O2_H
S KM_O2_HS 4 mgO2/l Sulfide oxidation normalization constant
KdHS1 KdHS1 100 L/kg Sulfide partition coefficient in layer 1
KdHS2 KdHS2 100 L/kg Sulfide partition coefficient in layer 2
Methane (Fresh water only)
JPOM
2
1
Diffusion
(dissolved)
+ flux from carbon diagenesis:
Maximum methane production
related to diagenesis of POC (in
oxygen units and corrected for
denitrification); that is remaining
carbon diagenesis is converted
to carbon dioxide and methane
Diffusion
(dissolved)-oxidation
Methane Solubility: Gas production
JPO
M
2
1
Diffusion (dissolved)
+ flux from carbon diagenesis: Maximum
methane production related to diagenesis of POC (in oxygen units and corrected for denitrification); that is remaining carbon
diagenesis is converted to carbon dioxide
and methane
Diffusion (dissolved)
-oxidation
0
20
40
60
80
100
120
140
160
180
0 5 10 15 20 25 30 35 40
CH
4
S
a
t
u
r
a
t
i
o
n
(
m
g
O
2
/
L
)
Temperature (oC)
Di Toro Eq. 10.51
Conv. from Yamamoto et al.
(20-T)OCH4,SAT
H C = 100 1+ 1.02410
where Ho is the depth of the water column
over the sediment.
Methane may be oxidized, producing sediment
oxygen demand, or exchanged with the water
column in either gaseous or dissolved form.
Methane Inputs
JPOM
2
1
Diffusion (dissolved)
+ flux from carbon diagenesis: Maximum methane
production related to diagenesis of POC (in oxygen units and corrected for denitrification); that is remaining carbon diagenesis is converted to carbon dioxide and
methane
Diffusion (dissolved)
-oxidation
κCH4 KappaCH4 0.7 m/d Methane oxidation reaction velocity
ΘCH4 ThtaCH4 1.079 none Temperature correction factor for κCH4
Solution Procedures
•Solution may be
–steady-state
–time variable
•Assume two layers, a “thin” (oxic,
depending on overlying water)
upper layer and anaerobic layer
–assume that layer 1 can be
considered at steady-state in relation
to layer 2 (matrix solution)
Fluxes to water column
•Computed based on surface transfer rate (s)
()11
tt tt
d T dO
J sfC C
∆∆++= −
•So, the computation of SOD requires an iterative solution
,2
12[ ( )]
LO
D SODKsH Oo
= = =
•That depends upon the SOD and overlying oxygen concentration
Computation of SOD
•Start with an initial estimate of the SOD
•Solve layer 1 and 2 equations for ammonia, nitrate, sulfide and methane
–Solve for the ammonia flux by establishing the chemical specific conditions
–Compute the oxygen consumed by nitrification (NCOD)
–Solve for the nitrate flux by establishing the chemical specific conditions
–Compute methane (fresh water) or sulfide (salt water) oxidation
•For salt water, compute sulfide reaction terms and compute SOD due to hydrogen sulfide
•For fresh water, compute methane flux by establishing the chemical specific
–Compare computed and saturation concentrations and correct
–Calculate the CSOD due to methane
–Compute the total CSOD due to sulfides or methane
–Compute flux terms
–Compute the total SOD due to the sulfide or methane, adding term for NCOD
–Refine the estimate of SOD. A root finding method is used to make the new estimate
•Go to step (2) if no convergence
2 20
2,1
2 2 2,1
T
NO tt
NO no O NO
NSOD a f Cs
κθ ∆
−
+=12
0.5(32)1.1414noa gO gN
−= =
2230.5NO O NO
−−+→
()2 2 T-20, ,1 , ,1
O 2 ,1
fHS D D HS P P tt
HS H S
ffCSOD Cs
κ κθ ∆++=
4 max 1(1 ( ))CH cCSOD CSOD Sech Hλ= −
42HSNHNOSOD CSOD CSOD CSOD=++
Salt water
Fresh water
442CHNHNOSOD CSOD CSOD CSOD=++
44
2 204,1
4 1 ,1
T
NH tt
NH no O NH d NH
NSOD a f f f Cs
κθ ∆
−
+=
4 2 221.5 2NH O H NO H O
++−+ →++
11.5(32)3.4314noa gO gN
−= =
Other Variables
•Once the SOD and s are known
(computed), then other model
variables, not impacting SOD,
may be computed
–Phosphates
–Silica
Phosphates
JPOM
2
1
Diffusion
(dissolved)
Bioturbation
(particulate)
Diffusion
(dissolved)Burial
(particulate)
Burial
(particulate)
+ Flux due to diagenesis of POP
Phosphate Input
Partitioning
where S1 and S2 are solids concentrations
in layer 1 and 2 and is a partition
coefficient
JPOM
2
1
Diffusion
(dissolved)
Bioturbation(particulate)
Diffusion
(dissolved)Burial
(particulate)
Burial
(particulate)
+ Flux due to diagenesis of POP
4,1 1,1 ,1
4,1 1 4,1 1
1 ;11
POdp
PO PO
SffSS
π
ππ==++
4,2 2,2 ,1
4,2 2 4,2 2
1 ;11
POdp
PO PO
SffSS
π
ππ==++
For layer 1, the aerobic layer, if the oxygen concentration in
the overlying water column exceeds a critical concentration
(O2CRIT, specified in input) then the partition coefficient is
increased to represent the trapping of phosphates, or
sorption onto iron oxyhydroxide. If the dissolved oxygen is
below the critical value, then the sorption coefficient in
layer 1 goes to zero.
Phosphate Input
JPOM
2
1
Diffusion
(dissolved)
Bioturbation(particulate)
Diffusion
(dissolved)Burial
(particulate)
Burial
(particulate)
+ Flux due to diagenesis of PON
-nitrification
KdPO4,2 KdPO42 20L/kg PO4 distribution (partition) coefficient under anaerobic conditions (layer 2)
∆KdPO4,1 dKdPO41F 20none Incremental distribution coefficient under aerobic conditions, fresh water
∆KdPO4,1 dKdPO41S 20none Incremental distribution coefficient under aerobic conditions, salt water
O2crit,PO4 O2critPO4 2mgO/L Critical oxygen conc. where Kd begins to decrease due to low DO
Silica
JPOM
2
1
Diffusion
(dissolved)
Bioturbation
(particulate)
Diffusion
(dissolved)Burial
(particulate)
Burial
(particulate)
+ Flux due to diagenesis of PSi
-decay
Silica Input
Partitioning
where S1 and S2 are solids concentrations
in layer 1 and 2 and is a partition
coefficient
JPOM
2
1
Diffusion
(dissolved)
Bioturbation(particulate)
Diffusion
(dissolved)Burial
(particulate)
Burial
(particulate)
+ Flux due to diagenesis of PSi -dissolution
,1 1,1 ,1
,1 1 ,1 1
1 ;11
Sidp
Si Si
SffSS
π
ππ==++
,2 2,2 ,1
,2 2 ,2 2
1 ;11
Sidp
Si Si
SffSS
π
ππ==++
For layer 1, the aerobic layer, if the
oxygen concentration in the
overlying water column exceeds a
critical concentration (O2CRITSI,
specified in input) then the partition
coefficient is increased to represent
the trapping of silica, or sorption
onto iron oxyhydroxide. If the
dissolved oxygen is below the critical
value, then the sorption coefficient in
layer 1 goes to zero as in (Di Toro
2001, Eq. 7.18)
( 20)3 ,2
,
T SiSid
Si m PSi
PkfPKκΘ−=+
PSi = the biogenic silica diagenesis flux to
which detrital silica was added; Km,PSi=half
saturation constant; kSi= rate of silica
dissolution;
Silica Input
JPOM
2
1
Diffusion
(dissolved)
Bioturbation(particulate)
Diffusion
(dissolved)Burial
(particulate)
Burial
(particulate)
+ Flux due to diagenesis of PSi-dissolution
-nitrification
? Presently not in
WASP; need to add
Inputs to Diagenesis Model
•Fluxes (C,N,P, Si; see previous slides)
•Rates and constants (see previous slides)
•Overlying water column [f(time, space)]
–NH4–NO2–NO3–PO4–O2
–Salinity
–Available Silica
–CH4–Temperature
–Salinity
Inputs to Diagenesis Model
•Initial Conditions
–POM for each G-class in Layer 2
•PON(1), PON(2), PON(3)
•POP(1), POP(2), POP(3)
•POC(1), POC(2), POC(3
–Dissolved concentrations (for layers 1
and 2)
•Dissolved NH3
•NO2•NO3•Dissolved PO4
From restart file, discussed later
Outputs from Diagenesis
Model
•Ammonia flux to water column (mg/m2-day)
•Nitrite flux to water column (mg/m2-day)
•Nitrate flux to water column (mg/m2-day)
•PO4 flux to water column (mg/m2-day)
•Aqueous Methane flux to water column (gO2/m2-day)
•Gas Methane flux to water column (gO2/m2-day)
•SOD Sediment Oxygen demand (gO2/m2-day)
•Sulfide flux to water column (gO2/m2-day)
•Dissolved (available) silica flux to water column
What’s Missing
•Iron and manganese
•multiple layers and ability to
simulate impact of scour and
sedimentation
•Impact of benthic algae
•Impacts/simulation of rooted
macrophytes
•Other stuff?
WASP 8 IMPLEMENTATION
WASP 8 IMPLEMENTATION: MODEL
TIME STEP
See: Martin and Wool, 2014, “WASP Sediment Diagenesis
Routines: Model Theory and User's Guide”
WASP 8 IMPLEMENTATION: MODEL
PARAMETERS
See: Martin and Wool, 2014, “WASP Sediment Diagenesis
Routines: Model Theory and User's Guide”
Descriptive
Descriptive
WASP 8 IMPLEMENTATION: MODEL
PARAMETERS
See: Martin and Wool, 2014, “WASP Sediment Diagenesis
Routines: Model Theory and User's Guide”
WC 1
WC 2
SD 1
WASP 8 IMPLEMENTATION: MODEL
CONSTANTS
See: Martin and Wool, 2014, “WASP Sediment Diagenesis
Routines: Model Theory and User's Guide”
WASP 8 IMPLEMENTATION: TYPICAL
PROCESS
Preliminary
Calibration and
Model Set-Up
Run model (including
diagenesis model) for
extended period (years) with
Restart Option
Estimate diagenesis
Initial Conditions, etc.
Check model predictions for
quasi-steady and realistic
conditions
Iterate as
necessary
QUESTIONS?
COMMENTS?
Utah Lake Water Quality Study
Overview of Utah Lake WASP Model Enhancements
and Progress
March 24, 2023
Utah Lake Model Enhancements
•Overall project objective
Develop a predictive model of hydrodynamics and water quality (organic matter, nutrient cycling
and phytoplankton dynamics) in Utah Lake
•Scope of work included following model enhancements to improve performance
of Utah Lake hydrodynamic and water quality models
Improved representation of physical processes by implementing a wind-wave model coupled to
EFDC
Incorporation of sediment diagenesis in all bottom cells of the model domain
Incorporation of pH and alkalinity as simulated state variables of the water quality model
Improvement of overall model performance, stability and run-time efficiency
•Purpose of this presentation is to explain how each of these have been
addressed and to summarize current model performance
Topics
•Background on Individual Models
EFDC
SWAN
WASP
•How the Models Work Together
•Model Hydrodynamic Performance
•Model Enhancements
Water Quality
–Sediment Diagenesis
–pH
Other
–Sediment Transport
–P-Binding
–Model efficiency
•Hydrodynamic model
•EFDC solves the equations of mass and momentum transport
•EFDC is a 2-D/3-D orthogonal curvilinear grid
•EFDC also provides solutions for salinity, temperature, and conservative
tracers with full density feedback to handle stratified conditions
Environmental Fluid Dynamics Model (EFDC)
Hydrodynamics
Dynamics
(E, u, v, w, mixing)Dye Temperature Salinity Near Field
Plume Drifter
•Wave Model
•Wind-generated waves in water bodies (coastal areas, lakes).
Simulating WAves Nearshores (SWAN)
Wind
Wind
z
x
Periphyton Biomass
D : C : N : P : Chl IP
IN
Phytoplankton Biomass
Group 3
D : C : N : P : Si: Chl DOGroup 2
D : C : N : P : Si: ChlGroup 1
D : C : N : P : Si : Chl
TIC
H2CO3 –HCO3-–CO32-
Total
Alkalinity
Particulate Detrital OM
SiPNCD
Dissolved OM
Si
P
N
CBOD1
CBOD2
CBOD3
Inorganic Nutrients
NO3PO4SiO2NH4
pH
atmosphere
uptake
excretion
Inorganic Solids
S3S1S2ox
i
d
a
t
i
o
n
ox
i
d
a
t
i
o
n
ni
t
r
i
f
i
c
a
t
i
o
n
photosynthesis and respiration
death
dissolution
mineralization
sorption
Water Quality Analysis Simulation Program (WASP)
EFDC
SWAN
•Grid cell volumes
•Velocities
•Temperatures
•ISS WASP
Hydrodynamics Hydro Linkage
Water Quality
Outputs
•Grid cell volumes
•Velocities
•Temperatures
•ISS
•Shear stress
Outputs
•Nutrient concentrations
•Algae biomass
•BOD
•Dissolved oxygen
Modeling Framework (How Models Work Together)
Linkage Between EFDC-SWAN
Computational grid
Simulated transport: WSE
Simulated transport: Temperature
4917390
4917450
Simulated transport: Significant Wave Height
Simulated transport: Shear Stress
Water Quality Model Enhancements
Incorporation of sediment diagenesis in all cells
Approaches to simulate sediment nutrient fluxes
•Descriptive: SOD, nutrient fluxes are user defined
•Predictive: Modeled based on sediment organic matter content and settling fluxes of organic matter
Basis of sediment diagenesis model
Initial conditions
•Organic C, N, P concentrations in
sediments (g/kg)
Sediment nutrient fluxes
•SOD, NH3, NO3, PO4
Kinetic rates
•POM dissolution
•DOM mineralization
•Nitrification
Basis of sediment diagenesis model
Example SOD
Incorporation of pH
Additional Enhancements
Sediment Transport
P-Binding
Model efficiency
Sediment transport
•Improvements to simulate wind induced wave impacts in EFDC alone, not
enough to impact water quality
•Incorporated EFDC code upgrades to send simulated ISS from EFDC to
WASP via hydrodynamic file
Coordinated effort with Tim Wool
Send shear stress and simulate ISS in WASP
Directly send ISS to WASP from EFDC
•Full impact of wind induced wave shear into sediment simulations
•WASP receives ISS concentrations and use them to calculate light extinction
•Mechanistic
Carbonate system
pH
Ca balance -budget
•Advantages
Full representation of inorganic
Carbon cycle/buffer
Impacts on pH
•Disadvantages
Not available in WASP
Needs development and incorporation into WASP
Computationally intensive
Extensive data required
From: http://ocean.stanford.edu/courses/bomc/chem/lecture_10.pdf
P-Binding Mechanistic Approach
•Simplified (Proposed)
Partition coefficient
Simulate P-deposition
Assumed equilibrium between dissolved/particulate fraction
•Cs (mg/Kg)= K* Cw(mg/L)
K (L/Kg)
•Advantages
Simple. Computationally inexpensive
Net impact captured. Settling
•Disadvantages
Approximation.
Independent from pH –Carbon cycle
Sediment
PO4-
settling
P-Binding Simplified Approach